在Linux上,“选项中的包”stats“(”defaultPackages“)未find”

我刚刚在我的Linux Ubuntu 12.04.5 LTS上安装了R 3.1.1。 然后,我想安装topicmodels包,所以我键入install.packages(“topicmodels”) ,但安装不起作用。

看来我没有在我的默认包中安装“统计”包。 这里是日志:

> install.packages("topicmodels"); Installing package into '/usr/local/lib/R/site-library' (as 'lib' is unspecified) --- Please select a CRAN mirror for use in this session --- also installing the dependencies 'modeltools', 'slam', 'tm' provo con l'URL 'http://cran.utstat.utoronto.ca/src/contrib/modeltools_0.2-21.tar.gz' Content type 'application/x-gzip' length 14794 bytes (14 Kb) URL aperto ================================================== downloaded 14 Kb provo con l'URL 'http://cran.utstat.utoronto.ca/src/contrib/slam_0.1-32.tar.gz' Content type 'application/x-gzip' length 46672 bytes (45 Kb) URL aperto ================================================== downloaded 45 Kb provo con l'URL 'http://cran.utstat.utoronto.ca/src/contrib/tm_0.6.tar.gz' Content type 'application/x-gzip' length 505212 bytes (493 Kb) URL aperto ================================================== downloaded 493 Kb provo con l'URL 'http://cran.utstat.utoronto.ca/src/contrib/topicmodels_0.2-1.tar.gz' Content type 'application/x-gzip' length 847889 bytes (828 Kb) URL aperto ================================================== downloaded 828 Kb Error in dyn.load(file, DLLpath = DLLpath, ...) : unable to load shared object '/usr/lib/R/library/stats/libs/stats.so': /usr/lib/liblapack.so.3gf: undefined symbol: ATL_chemv Durante l'avvio - Warning message: package 'stats' in options("defaultPackages") was not found * installing *source* package 'modeltools' ... ** package 'modeltools' successfully unpacked and MD5 sums checked ** R ** inst ** preparing package for lazy loading Error in dyn.load(file, DLLpath = DLLpath, ...) : unable to load shared object '/usr/lib/R/library/stats/libs/stats.so': /usr/lib/liblapack.so.3gf: undefined symbol: ATL_chemv Error : package 'stats' could not be loaded ERROR: lazy loading failed for package 'modeltools' * removing '/usr/local/lib/R/site-library/modeltools' Error in dyn.load(file, DLLpath = DLLpath, ...) : unable to load shared object '/usr/lib/R/library/stats/libs/stats.so': /usr/lib/liblapack.so.3gf: undefined symbol: ATL_chemv Durante l'avvio - Warning message: package 'stats' in options("defaultPackages") was not found * installing *source* package 'slam' ... ** package 'slam' successfully unpacked and MD5 sums checked ** libs gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c apply.c -o apply.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c grouped.c -o grouped.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c sparse.c -o sparse.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c util.c -o util.o gcc -std=gnu99 -shared -Wl,-Bsymbolic-functions -Wl,-z,relro -o slam.so apply.o grouped.o sparse.o util.o -lblas -lgfortran -lm -lquadmath -L/usr/lib/R/lib -lR installing to /usr/local/lib/R/site-library/slam/libs ** R ** preparing package for lazy loading Error in dyn.load(file, DLLpath = DLLpath, ...) : unable to load shared object '/usr/lib/R/library/stats/libs/stats.so': /usr/lib/liblapack.so.3gf: undefined symbol: ATL_chemv ERROR: lazy loading failed for package 'slam' * removing '/usr/local/lib/R/site-library/slam' Error in dyn.load(file, DLLpath = DLLpath, ...) : unable to load shared object '/usr/lib/R/library/stats/libs/stats.so': /usr/lib/liblapack.so.3gf: undefined symbol: ATL_chemv Durante l'avvio - Warning message: package 'stats' in options("defaultPackages") was not found ERROR: dependency 'slam' is not available for package 'tm' * removing '/usr/local/lib/R/site-library/tm' Error in dyn.load(file, DLLpath = DLLpath, ...) : unable to load shared object '/usr/lib/R/library/stats/libs/stats.so': /usr/lib/liblapack.so.3gf: undefined symbol: ATL_chemv Durante l'avvio - Warning message: package 'stats' in options("defaultPackages") was not found ERROR: dependencies 'modeltools', 'slam', 'tm' are not available for package 'topicmodels' * removing '/usr/local/lib/R/site-library/topicmodels' The downloaded source packages are in '/tmp/RtmpIppG4O/downloaded_packages' Warning messages: 1: In install.packages("topicmodels") : installation of package 'modeltools' had non-zero exit status 2: In install.packages("topicmodels") : installation of package 'slam' had non-zero exit status 3: In install.packages("topicmodels") : installation of package 'tm' had non-zero exit status 4: In install.packages("topicmodels") : installation of package 'topicmodels' had non-zero exit status 

这是dpkg -l |的输出 grep“blas \ | atlas”命令:

 ii libatlas3gf-base 3.8.4-3build1 Automatically Tuned Linear Algebra Software, generic shared ii libblas-dev 1.2.20110419-2ubuntu1 Basic Linear Algebra Subroutines 3, static library ii libblas3gf 1.2.20110419-2ubuntu1 Basic Linear Algebra Reference implementations, shared library ii libopenblas-base 0.1alpha2.2-3 Optimized BLAS (linear algebra) library based on GotoBLAS2 ii libopenblas-dev 0.1alpha2.2-3 Optimized BLAS (linear algebra) library based on GotoBLAS2 

你有什么build议如何解决这个问题?